Carnation DB

Dca31950.1

Annotation

6-exons
f-1
sp|B9MU68_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_590056#GO:0003950#1F0P0C
AT1G32230.1 | Symbols: RCD1, CEO, CEO1, ATP8, AtRCD1 | WWE protein-protein interaction domain protein family | chr1:11613427-11615894 FORWARD LENGTH=589
Repeat List (scaffold323)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca31950.1	1	589	592	45.1	589	43	3e-134
Target_name	Start	End	Length	Cov(%)
sp\|B9MU68_POPTR	1	622	623	99.83

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca31950.1	1	574	592	35.3	574	36	1e-98
Target_name	Start	End	Length	Cov(%)
AT1G32230.1	1	569	589	96.6

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold323	Augus-PASA	mRNA	43874	47648	.	+	.	ID=Dca31950.1;Parent=Dca31950
scaffold323	Augus-PASA	exon	43874	44982	.	+	.	ID=Dca31950.1.exon1;Parent=Dca31950.1
scaffold323	Augus-PASA	exon	45696	45931	.	+	.	ID=Dca31950.1.exon2;Parent=Dca31950.1
scaffold323	Augus-PASA	exon	46237	46337	.	+	.	ID=Dca31950.1.exon3;Parent=Dca31950.1
scaffold323	Augus-PASA	exon	46556	46735	.	+	.	ID=Dca31950.1.exon4;Parent=Dca31950.1
scaffold323	Augustus	exon	46836	46931	.	+	.	ID=Dca31950.1.exon5;Parent=Dca31950.1
scaffold323	Augustus	exon	47592	47648	.	+	.	ID=Dca31950.1.exon6;Parent=Dca31950.1