Carnation DB

Dca31953.1

Annotation

6-exons
f-1
sp|F6HT31_VITVI#Pseudouridine synthase#Vitis vinifera (Grape)#OrderedLocusNames=VIT_02s0012g02420#GO:0009982;GO:0003723;GO:0001522;GO:0008033#2F2P0C
Repeat List (scaffold323)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca31953.1	24	335	336	63.69	312	64	8e-121
Target_name	Start	End	Length	Cov(%)
sp\|F6HT31_VITVI	97	432	433	77.59

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca31953.1	275	335	336	13.39	61	74	5e-16
Target_name	Start	End	Length	Cov(%)
AT5G35400.2	410	470	471	12.95

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold323	Augustus	mRNA	61595	64582	.	-	.	ID=Dca31953.1;Parent=Dca31953
scaffold323	Augustus	exon	61595	61780	.	-	.	ID=Dca31953.1.exon1;Parent=Dca31953.1
scaffold323	Augustus	exon	62738	62807	.	-	.	ID=Dca31953.1.exon2;Parent=Dca31953.1
scaffold323	Augustus	exon	62904	63235	.	-	.	ID=Dca31953.1.exon3;Parent=Dca31953.1
scaffold323	Augustus	exon	63356	63447	.	-	.	ID=Dca31953.1.exon4;Parent=Dca31953.1
scaffold323	Augustus	exon	63947	64092	.	-	.	ID=Dca31953.1.exon5;Parent=Dca31953.1
scaffold323	Augustus	exon	64398	64582	.	-	.	ID=Dca31953.1.exon6;Parent=Dca31953.1