Carnation DB

Dca31957.1

Annotation

9-exons
f-1
sp|F6H9N9_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_11s0065g00160#unknown#0F0P0C
Os08t0556000-01 Similar to YTH domain protein 2 (High-glucose-regulated protein 8) (NY-REN-2 antigen) (CLL-associated antigen KW-14).
Repeat List (scaffold323)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca31957.1	49	589	600	46.66	541	49	3e-138
Target_name	Start	End	Length	Cov(%)
sp\|F6H9N9_VITVI	39	599	735	76.32

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca31957.1	17	581	600	40.5	565	41	1e-105
Target_name	Start	End	Length	Cov(%)
Os08t0556000-01	30	593	625	90.24

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold323	Augustus	mRNA	85996	90215	.	-	.	ID=Dca31957.1;Parent=Dca31957
scaffold323	Augustus	exon	85996	86286	.	-	.	ID=Dca31957.1.exon1;Parent=Dca31957.1
scaffold323	Augustus	exon	86701	86913	.	-	.	ID=Dca31957.1.exon2;Parent=Dca31957.1
scaffold323	Augustus	exon	87163	87708	.	-	.	ID=Dca31957.1.exon3;Parent=Dca31957.1
scaffold323	Augustus	exon	87893	88074	.	-	.	ID=Dca31957.1.exon4;Parent=Dca31957.1
scaffold323	Augustus	exon	88194	88437	.	-	.	ID=Dca31957.1.exon5;Parent=Dca31957.1
scaffold323	Augustus	exon	88532	88608	.	-	.	ID=Dca31957.1.exon6;Parent=Dca31957.1
scaffold323	Augus-PASA	exon	88737	88917	.	-	.	ID=Dca31957.1.exon7;Parent=Dca31957.1
scaffold323	Augus-PASA	exon	89073	89115	.	-	.	ID=Dca31957.1.exon8;Parent=Dca31957.1
scaffold323	Augus-PASA	exon	90190	90215	.	-	.	ID=Dca31957.1.exon9;Parent=Dca31957.1