Dca3196.1
Annotation
- 3-exons
- f-1
- sp|A5BEK1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_026680#GO:0005634;GO:0004190;GO:0003723;GO:0003964;GO:0015074;GO:0006508;GO:0006278#3F3P1C
- sp|Q9LHM4_ARATH#Gypsy/Ty-3 retroelement polyprotein#Arabidopsis thaliana (Mouse-ear cress)#Name=T21B14.24#GO:0005634;GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P1C
- Repeat List (scaffold1113)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3196.1 |
1 |
433 |
483 |
30.84 |
433 |
32 |
6e-51
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5BEK1_VITVI |
125 |
567 |
1469 |
30.15 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3196.1 |
126 |
455 |
483 |
20.49 |
330 |
30 |
5e-27
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0170800-01 |
14 |
300 |
332 |
86.44 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1113 |
Augustus |
mRNA |
29182 |
31064 |
. |
+ |
. |
ID=Dca3196.1;Parent=Dca3196 |
| scaffold1113 |
Augustus |
exon |
29182 |
29466 |
. |
+ |
. |
ID=Dca3196.1.exon1;Parent=Dca3196.1 |
| scaffold1113 |
Augustus |
exon |
29628 |
30580 |
. |
+ |
. |
ID=Dca3196.1.exon2;Parent=Dca3196.1 |
| scaffold1113 |
Augustus |
exon |
30851 |
31064 |
. |
+ |
. |
ID=Dca3196.1.exon3;Parent=Dca3196.1 |
