Carnation DB

Dca3199.1

Annotation

5-exons
f-1
sp|F6HJ29_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_02s0087g00610#unknown#0F0P0C
AT4G19390.1 | Symbols: | Uncharacterised protein family (UPF0114) | chr4:10574903-10576355 REVERSE LENGTH=273
Repeat List (scaffold1113)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3199.1	32	235	235	58.29	204	67	1e-70
Target_name	Start	End	Length	Cov(%)
sp\|F6HJ29_VITVI	49	253	253	81.02

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3199.1	60	234	235	47.65	175	64	6e-61
Target_name	Start	End	Length	Cov(%)
AT4G19390.1	98	272	273	64.1

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1113	Augus-PASA	mRNA	55218	57873	.	+	.	ID=Dca3199.1;Parent=Dca3199
scaffold1113	Augus-PASA	exon	55218	55412	.	+	.	ID=Dca3199.1.exon1;Parent=Dca3199.1
scaffold1113	Augus-PASA	exon	55828	55905	.	+	.	ID=Dca3199.1.exon2;Parent=Dca3199.1
scaffold1113	Augus-PASA	exon	56644	56725	.	+	.	ID=Dca3199.1.exon3;Parent=Dca3199.1
scaffold1113	Augus-PASA	exon	57316	57458	.	+	.	ID=Dca3199.1.exon4;Parent=Dca3199.1
scaffold1113	Augus-PASA	exon	57664	57873	.	+	.	ID=Dca3199.1.exon5;Parent=Dca3199.1