Dca31991.1
Annotation
- 3-exons
- f-1
- sp|D7KPM2_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_890022#unknown#0F0P0C
- AT3G07610.3 | Symbols: IBM1 | Transcription factor jumonji (jmjC) domain-containing protein | chr3:2426148-2432876 FORWARD LENGTH=1049
- Repeat List (scaffold3233)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca31991.1 |
6 |
109 |
148 |
39.86 |
104 |
55 |
2e-27
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D7KPM2_ARALL |
472 |
580 |
585 |
18.63 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca31991.1 |
8 |
128 |
148 |
43.24 |
121 |
36 |
6e-23
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G07610.3 |
751 |
929 |
1049 |
17.06 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3233 |
Augustus |
mRNA |
19853 |
20922 |
. |
+ |
. |
ID=Dca31991.1;Parent=Dca31991 |
| scaffold3233 |
Augustus |
exon |
19853 |
20032 |
. |
+ |
. |
ID=Dca31991.1.exon1;Parent=Dca31991.1 |
| scaffold3233 |
Augustus |
exon |
20529 |
20633 |
. |
+ |
. |
ID=Dca31991.1.exon2;Parent=Dca31991.1 |
| scaffold3233 |
Augustus |
exon |
20761 |
20922 |
. |
+ |
. |
ID=Dca31991.1.exon3;Parent=Dca31991.1 |
