Carnation DB

Dca32000.1

Annotation

6-exons
f-1
sp|F6HBY9_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_09s0018g01710#GO:0003676;GO:0000166#2F0P0C
AT3G04500.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr3:1212065-1213795 REVERSE LENGTH=245
Repeat List (scaffold3235)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca32000.1	15	227	228	76.75	213	73	3e-96
Target_name	Start	End	Length	Cov(%)
sp\|F6HBY9_VITVI	16	256	257	93.77

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca32000.1	33	227	228	69.29	195	82	2e-91
Target_name	Start	End	Length	Cov(%)
AT3G04500.1	52	244	245	78.77

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3235	Augustus	mRNA	17489	22125	.	+	.	ID=Dca32000.1;Parent=Dca32000
scaffold3235	Augustus	exon	17489	17662	.	+	.	ID=Dca32000.1.exon1;Parent=Dca32000.1
scaffold3235	Augustus	exon	19640	19817	.	+	.	ID=Dca32000.1.exon2;Parent=Dca32000.1
scaffold3235	Augustus	exon	20542	20639	.	+	.	ID=Dca32000.1.exon3;Parent=Dca32000.1
scaffold3235	Augustus	exon	21404	21500	.	+	.	ID=Dca32000.1.exon4;Parent=Dca32000.1
scaffold3235	Augustus	exon	21899	21984	.	+	.	ID=Dca32000.1.exon5;Parent=Dca32000.1
scaffold3235	Augustus	exon	22072	22125	.	+	.	ID=Dca32000.1.exon6;Parent=Dca32000.1