Carnation DB

Dca32067.1

Annotation

6-exons
f-1
sp|B9MWW5_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_826973#GO:0016020#0F0P1C
AT1G54320.1 | Symbols: | LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein | chr1:20275732-20277793 REVERSE LENGTH=349
Repeat List (scaffold3242)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca32067.1	5	39	281	9.96	35	74	1e-07
Target_name	Start	End	Length	Cov(%)
sp\|B9MWW5_POPTR	13	50	353	10.76

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca32067.1	11	39	281	8.89	29	87	4e-09
Target_name	Start	End	Length	Cov(%)
AT1G54320.1	22	50	349	8.3

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3242	Augustus	mRNA	34177	39472	.	-	.	ID=Dca32067.1;Parent=Dca32067
scaffold3242	Augustus	exon	34177	34237	.	-	.	ID=Dca32067.1.exon1;Parent=Dca32067.1
scaffold3242	Augustus	exon	34985	35274	.	-	.	ID=Dca32067.1.exon2;Parent=Dca32067.1
scaffold3242	Augustus	exon	35863	36172	.	-	.	ID=Dca32067.1.exon3;Parent=Dca32067.1
scaffold3242	Augustus	exon	37175	37245	.	-	.	ID=Dca32067.1.exon4;Parent=Dca32067.1
scaffold3242	Augustus	exon	38613	38671	.	-	.	ID=Dca32067.1.exon5;Parent=Dca32067.1
scaffold3242	Augustus	exon	39418	39472	.	-	.	ID=Dca32067.1.exon6;Parent=Dca32067.1