Carnation DB

Dca32071.1

Annotation

5-exons
f-1
sp|F4NCH1_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0003676;GO:0008270#2F0P0C
sp|Q2HX36_IPOBA#LINE-type retrotransposon LIb DNA, complete sequence, Insertion at the S10 site#Ipomoea batatas (Sweet potato) (Convolvulus batatas)#unknown#GO:0003676;GO:0008270#2F0P0C
Repeat List (scaffold3243)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca32071.1	260	600	733	22.78	341	46	1e-80
Target_name	Start	End	Length	Cov(%)
sp\|F4NCH1_BETVU	30	367	678	49.85

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca32071.1	333	548	733	10.36	216	35	2e-36
Target_name	Start	End	Length	Cov(%)
AT2G01050.1	41	259	515	42.52

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3243	Augustus	mRNA	21390	25089	.	-	.	ID=Dca32071.1;Parent=Dca32071
scaffold3243	Augustus	exon	21390	21742	.	-	.	ID=Dca32071.1.exon1;Parent=Dca32071.1
scaffold3243	Augustus	exon	22275	23439	.	-	.	ID=Dca32071.1.exon2;Parent=Dca32071.1
scaffold3243	Augustus	exon	23662	23827	.	-	.	ID=Dca32071.1.exon3;Parent=Dca32071.1
scaffold3243	Augustus	exon	23992	24149	.	-	.	ID=Dca32071.1.exon4;Parent=Dca32071.1
scaffold3243	Augustus	exon	24730	25089	.	-	.	ID=Dca32071.1.exon5;Parent=Dca32071.1