Dca32097.1
Annotation
- 4-exons
- f-1
- sp|C5XL09_SORBI#Putative uncharacterized protein Sb03g001780#Sorghum bicolor (Sorghum) (Sorghum vulgare)#Name=Sb03g001780#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Os06t0484800-00 Reverse transcriptase domain containing protein.
- Repeat List (scaffold3248)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca32097.1 |
1 |
62 |
461 |
6.5 |
62 |
49 |
4e-10
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|C5XL09_SORBI |
110 |
171 |
631 |
9.82 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca32097.1 |
1 |
62 |
461 |
5.2 |
62 |
39 |
2e-07
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G20520.1 |
9 |
69 |
376 |
16.22 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3248 |
Augustus |
mRNA |
10072 |
12089 |
. |
- |
. |
ID=Dca32097.1;Parent=Dca32097 |
| scaffold3248 |
Augustus |
exon |
10072 |
10479 |
. |
- |
. |
ID=Dca32097.1.exon1;Parent=Dca32097.1 |
| scaffold3248 |
Augustus |
exon |
10555 |
11180 |
. |
- |
. |
ID=Dca32097.1.exon2;Parent=Dca32097.1 |
| scaffold3248 |
Augustus |
exon |
11262 |
11426 |
. |
- |
. |
ID=Dca32097.1.exon3;Parent=Dca32097.1 |
| scaffold3248 |
Augustus |
exon |
11903 |
12089 |
. |
- |
. |
ID=Dca32097.1.exon4;Parent=Dca32097.1 |
