Carnation DB

Dca3211.1

Annotation

7-exons
f-1
sp|D7TCL1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_11s0016g01760#GO:0016787#1F0P0C
AT4G29820.1 | Symbols: CFIM-25, ATCFIM-25 | homolog of CFIM-25 | chr4:14596047-14597317 REVERSE LENGTH=222
Repeat List (scaffold11134)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3211.1	25	218	218	65.13	194	72	2e-79
Target_name	Start	End	Length	Cov(%)
sp\|D7TCL1_VITVI	95	291	291	67.69

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3211.1	21	217	218	59.17	197	65	6e-74
Target_name	Start	End	Length	Cov(%)
AT4G29820.1	22	221	222	90.09

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold11134	Augus-PASA	mRNA	13597	15991	.	-	.	ID=Dca3211.1;Parent=Dca3211
scaffold11134	Augus-PASA	exon	13597	13668	.	-	.	ID=Dca3211.1.exon1;Parent=Dca3211.1
scaffold11134	Augus-PASA	exon	14142	14252	.	-	.	ID=Dca3211.1.exon2;Parent=Dca3211.1
scaffold11134	Augus-PASA	exon	14346	14432	.	-	.	ID=Dca3211.1.exon3;Parent=Dca3211.1
scaffold11134	Augus-PASA	exon	14715	14788	.	-	.	ID=Dca3211.1.exon4;Parent=Dca3211.1
scaffold11134	Augus-PASA	exon	14889	14982	.	-	.	ID=Dca3211.1.exon5;Parent=Dca3211.1
scaffold11134	Augus-PASA	exon	15667	15712	.	-	.	ID=Dca3211.1.exon6;Parent=Dca3211.1
scaffold11134	Augus-PASA	exon	15819	15991	.	-	.	ID=Dca3211.1.exon7;Parent=Dca3211.1