Dca32156.1
Annotation
- 3-exons
- f-2
- sp|F6HLM8_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0007g05930#GO:0008380#0F1P0C
- AT2G41500.1 | Symbols: LIS, EMB2776 | WD-40 repeat family protein / small nuclear ribonucleoprotein Prp4p-related | chr2:17304319-17306855 REVERSE LENGTH=554
- Repeat List (scaffold3255)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca32156.1 |
10 |
117 |
131 |
25.19 |
108 |
31 |
2e-08
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F6HLM8_VITVI |
371 |
476 |
659 |
16.08 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca32156.1 |
8 |
131 |
131 |
64.88 |
124 |
67 |
7e-48
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT2G41500.1 |
426 |
553 |
554 |
23.1 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3255 |
Augustus |
mRNA |
1 |
1373 |
. |
+ |
. |
ID=Dca32156.1;Parent=Dca32156 |
| scaffold3255 |
Augustus |
exon |
1 |
220 |
. |
+ |
. |
ID=Dca32156.1.exon1;Parent=Dca32156.1 |
| scaffold3255 |
Augustus |
exon |
311 |
392 |
. |
+ |
. |
ID=Dca32156.1.exon2;Parent=Dca32156.1 |
| scaffold3255 |
Augustus |
exon |
1279 |
1373 |
. |
+ |
. |
ID=Dca32156.1.exon3;Parent=Dca32156.1 |
