Carnation DB

Dca32188.1

Annotation

5-exons
f-1
sp|D7SYH9_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_05s0077g00590#GO:0005840;GO:0019843;GO:0003735;GO:0006412#2F1P1C
AT3G17170.1 | Symbols: RFC3 | Translation elongation factor EF1B/ribosomal protein S6 family protein | chr3:5853186-5854853 REVERSE LENGTH=314
Repeat List (scaffold326)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca32188.1	1	187	261	46.74	187	66	1e-70
Target_name	Start	End	Length	Cov(%)
sp\|D7SYH9_VITVI	54	237	301	61.12

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca32188.1	16	187	261	43.29	172	66	2e-69
Target_name	Start	End	Length	Cov(%)
AT3G17170.1	59	230	314	54.77

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold326	Augus-PASA	mRNA	51738	54538	.	-	.	ID=Dca32188.1;Parent=Dca32188
scaffold326	Augus-PASA	exon	51738	52216	.	-	.	ID=Dca32188.1.exon1;Parent=Dca32188.1
scaffold326	Augus-PASA	exon	52523	52600	.	-	.	ID=Dca32188.1.exon2;Parent=Dca32188.1
scaffold326	Augus-PASA	exon	53170	53226	.	-	.	ID=Dca32188.1.exon3;Parent=Dca32188.1
scaffold326	Augus-PASA	exon	53325	53379	.	-	.	ID=Dca32188.1.exon4;Parent=Dca32188.1
scaffold326	Augus-PASA	exon	54422	54538	.	-	.	ID=Dca32188.1.exon5;Parent=Dca32188.1