Carnation DB

Dca3229.1

Annotation

7-exons
f-1
sp|C6TMZ7_SOYBN#Putative uncharacterized protein#Glycine max (Soybean) (Glycine hispida)#unknown#GO:0016021#0F0P1C
AT1G32400.1 | Symbols: TOM2A | tobamovirus multiplication 2A | chr1:11689393-11690873 REVERSE LENGTH=280
Repeat List (scaffold1114)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3229.1	234	328	328	19.2	95	65	3e-29
Target_name	Start	End	Length	Cov(%)
sp\|C6TMZ7_SOYBN	186	283	283	34.62

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3229.1	234	328	328	16.76	95	57	4e-26
Target_name	Start	End	Length	Cov(%)
AT1G32400.1	184	280	280	34.64

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1114	Augustus	mRNA	98988	105750	.	+	.	ID=Dca3229.1;Parent=Dca3229
scaffold1114	Augustus	exon	98988	99172	.	+	.	ID=Dca3229.1.exon1;Parent=Dca3229.1
scaffold1114	Augus-PASA	exon	100084	100183	.	+	.	ID=Dca3229.1.exon2;Parent=Dca3229.1
scaffold1114	Augus-PASA	exon	101068	101148	.	+	.	ID=Dca3229.1.exon3;Parent=Dca3229.1
scaffold1114	Augus-PASA	exon	101241	101345	.	+	.	ID=Dca3229.1.exon4;Parent=Dca3229.1
scaffold1114	Augus-PASA	exon	101775	101978	.	+	.	ID=Dca3229.1.exon5;Parent=Dca3229.1
scaffold1114	Augus-PASA	exon	104785	104988	.	+	.	ID=Dca3229.1.exon6;Parent=Dca3229.1
scaffold1114	Augus-PASA	exon	105643	105750	.	+	.	ID=Dca3229.1.exon7;Parent=Dca3229.1