Carnation DB

Dca32290.1

Annotation

5-exons
f-1
sp|F4NCG3_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
Os03t0643433-00 Similar to J013022N21, full insert sequence.
Repeat List (scaffold327)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca32290.1	204	698	708	26.69	495	33	6e-80
Target_name	Start	End	Length	Cov(%)
sp\|F4NCG3_BETVU	248	827	1114	52.06

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca32290.1	412	708	708	13.41	297	32	1e-42
Target_name	Start	End	Length	Cov(%)
Os03t0643433-00	61	357	644	46.11

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold327	Augustus	mRNA	145201	148403	.	-	.	ID=Dca32290.1;Parent=Dca32290
scaffold327	Augustus	exon	145201	146094	.	-	.	ID=Dca32290.1.exon1;Parent=Dca32290.1
scaffold327	Augustus	exon	146190	146556	.	-	.	ID=Dca32290.1.exon2;Parent=Dca32290.1
scaffold327	Augustus	exon	146700	146890	.	-	.	ID=Dca32290.1.exon3;Parent=Dca32290.1
scaffold327	Augustus	exon	147474	147772	.	-	.	ID=Dca32290.1.exon4;Parent=Dca32290.1
scaffold327	Augustus	exon	148028	148403	.	-	.	ID=Dca32290.1.exon5;Parent=Dca32290.1