Dca32328.1
Annotation
- 2-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Os09t0122300-01 Similar to Zinc knuckle family protein.
- Repeat List (scaffold3275)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca32328.1 |
4 |
516 |
542 |
52.95 |
513 |
55 |
5e-142
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
294 |
789 |
1717 |
28.88 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca32328.1 |
189 |
319 |
542 |
8.48 |
131 |
36 |
1e-12
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0292200-01 |
62 |
189 |
192 |
66.66 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3275 |
Augustus |
mRNA |
3055 |
4748 |
. |
- |
. |
ID=Dca32328.1;Parent=Dca32328 |
| scaffold3275 |
Augustus |
exon |
3055 |
4155 |
. |
- |
. |
ID=Dca32328.1.exon1;Parent=Dca32328.1 |
| scaffold3275 |
Augustus |
exon |
4221 |
4748 |
. |
- |
. |
ID=Dca32328.1.exon2;Parent=Dca32328.1 |
