Dca32332.1
Annotation
- 3-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- sp|Q9FZN9_ARATH#Retroelement pol polyprotein-like#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P0C
- Repeat List (scaffold3275)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca32332.1 |
57 |
670 |
708 |
37.71 |
614 |
42 |
2e-113
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
33 |
645 |
1717 |
35.7 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca32332.1 |
527 |
619 |
708 |
4.23 |
93 |
33 |
7e-09
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0292200-01 |
98 |
189 |
192 |
47.91 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3275 |
Augustus |
mRNA |
30738 |
35930 |
. |
- |
. |
ID=Dca32332.1;Parent=Dca32332 |
| scaffold3275 |
Augustus |
exon |
30738 |
30859 |
. |
- |
. |
ID=Dca32332.1.exon1;Parent=Dca32332.1 |
| scaffold3275 |
Augustus |
exon |
33818 |
35657 |
. |
- |
. |
ID=Dca32332.1.exon2;Parent=Dca32332.1 |
| scaffold3275 |
Augustus |
exon |
35766 |
35930 |
. |
- |
. |
ID=Dca32332.1.exon3;Parent=Dca32332.1 |
