Carnation DB

Dca32399.1

Annotation

5-exons
f-1
sp|B9S778_RICCO#Armadillo repeat-containing protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0774230#GO:0008270#1F0P0C
Repeat List (scaffold3284)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca32399.1	4	180	191	47.12	177	50	4e-48
Target_name	Start	End	Length	Cov(%)
sp\|B9S778_RICCO	60	238	719	24.89

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca32399.1	3	186	191	46.59	184	48	3e-45
Target_name	Start	End	Length	Cov(%)
AT4G33940.1	66	250	262	70.61

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3284	Augustus	mRNA	29987	35377	.	-	.	ID=Dca32399.1;Parent=Dca32399
scaffold3284	Augustus	exon	29987	30120	.	-	.	ID=Dca32399.1.exon1;Parent=Dca32399.1
scaffold3284	Augustus	exon	31133	31184	.	-	.	ID=Dca32399.1.exon2;Parent=Dca32399.1
scaffold3284	Augustus	exon	33128	33226	.	-	.	ID=Dca32399.1.exon3;Parent=Dca32399.1
scaffold3284	Augustus	exon	34762	34958	.	-	.	ID=Dca32399.1.exon4;Parent=Dca32399.1
scaffold3284	Augustus	exon	35284	35377	.	-	.	ID=Dca32399.1.exon5;Parent=Dca32399.1