Carnation DB

Dca32425.1

Annotation

12-exons
f-1
sp|B9IPA8_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_573723#GO:0005509#1F0P0C
AT5G28850.2 | Symbols: | Calcium-binding EF-hand family protein | chr5:10877360-10881278 REVERSE LENGTH=536
Repeat List (scaffold329)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca32425.1	6	539	539	82	534	83	0
Target_name	Start	End	Length	Cov(%)
sp\|B9IPA8_POPTR	5	538	538	99.25

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca32425.1	1	539	539	77.92	539	78	0
Target_name	Start	End	Length	Cov(%)
AT5G28850.2	2	536	536	99.81

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold329	Augus-PASA	mRNA	21450	28193	.	-	.	ID=Dca32425.1;Parent=Dca32425
scaffold329	Augus-PASA	exon	21450	21590	.	-	.	ID=Dca32425.1.exon1;Parent=Dca32425.1
scaffold329	Augus-PASA	exon	21678	21803	.	-	.	ID=Dca32425.1.exon2;Parent=Dca32425.1
scaffold329	Augus-PASA	exon	22236	22392	.	-	.	ID=Dca32425.1.exon3;Parent=Dca32425.1
scaffold329	Augus-PASA	exon	22547	22656	.	-	.	ID=Dca32425.1.exon4;Parent=Dca32425.1
scaffold329	Augus-PASA	exon	22773	22920	.	-	.	ID=Dca32425.1.exon5;Parent=Dca32425.1
scaffold329	Augus-PASA	exon	24031	24172	.	-	.	ID=Dca32425.1.exon6;Parent=Dca32425.1
scaffold329	Augus-PASA	exon	24456	24546	.	-	.	ID=Dca32425.1.exon7;Parent=Dca32425.1
scaffold329	Augus-PASA	exon	24706	24811	.	-	.	ID=Dca32425.1.exon8;Parent=Dca32425.1
scaffold329	Augus-PASA	exon	26089	26188	.	-	.	ID=Dca32425.1.exon9;Parent=Dca32425.1
scaffold329	Augus-PASA	exon	26263	26368	.	-	.	ID=Dca32425.1.exon10;Parent=Dca32425.1
scaffold329	Augus-PASA	exon	26494	26736	.	-	.	ID=Dca32425.1.exon11;Parent=Dca32425.1
scaffold329	Augus-PASA	exon	28044	28193	.	-	.	ID=Dca32425.1.exon12;Parent=Dca32425.1