Carnation DB

Dca32440.1

Annotation

7-exons
f-1
sp|B9GUG8_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_816312#GO:0005794;GO:0016021;GO:0006486#0F1P2C
sp|B9RJC3_RICCO#Beta-1,3-galactosyltransferase sqv-2, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1033040#GO:0005794;GO:0016021;GO:0047220;GO:0006486#1F1P2C
Repeat List (scaffold329)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca32440.1	7	77	85	37.64	71	45	6e-07
Target_name	Start	End	Length	Cov(%)
sp\|B4FND6_MAIZE	21	92	100	72

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca32440.1	1	310	310	64.83	310	65	4e-121
Target_name	Start	End	Length	Cov(%)
Os02t0566800-01	90	388	390	76.66

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold329	Augustus	mRNA	151231	153102	.	-	.	ID=Dca32440.1;Parent=Dca32440
scaffold329	Augustus	exon	151231	151483	.	-	.	ID=Dca32440.1.exon1;Parent=Dca32440.1
scaffold329	Augustus	exon	151618	151743	.	-	.	ID=Dca32440.1.exon2;Parent=Dca32440.1
scaffold329	Augustus	exon	151903	151990	.	-	.	ID=Dca32440.1.exon3;Parent=Dca32440.1
scaffold329	Augustus	exon	152102	152222	.	-	.	ID=Dca32440.1.exon4;Parent=Dca32440.1
scaffold329	Augustus	exon	152308	152380	.	-	.	ID=Dca32440.1.exon5;Parent=Dca32440.1
scaffold329	Augustus	exon	152651	152714	.	-	.	ID=Dca32440.1.exon6;Parent=Dca32440.1
scaffold329	Augustus	exon	152895	153102	.	-	.	ID=Dca32440.1.exon7;Parent=Dca32440.1