Carnation DB

Dca3247.1

Annotation

6-exons
f-1
sp|F6GXW1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0058g01440#GO:0005524;GO:0004674#2F0P0C
sp|B9SRT9_RICCO#Ribosomal protein S6 kinase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1058560#GO:0005840;GO:0005524;GO:0004697#2F0P1C
Repeat List (scaffold1115)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3247.1	43	369	369	66.66	327	76	9e-149
Target_name	Start	End	Length	Cov(%)
sp\|F6GXW1_VITVI	153	472	489	65.43

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3247.1	27	369	369	65.31	343	71	6e-146
Target_name	Start	End	Length	Cov(%)
Os03t0334000-02	135	464	481	68.6

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1115	Augus-PASA	mRNA	46322	47945	.	+	.	ID=Dca3247.1;Parent=Dca3247
scaffold1115	Augus-PASA	exon	46322	46684	.	+	.	ID=Dca3247.1.exon1;Parent=Dca3247.1
scaffold1115	Augus-PASA	exon	46785	46867	.	+	.	ID=Dca3247.1.exon2;Parent=Dca3247.1
scaffold1115	Augus-PASA	exon	46963	47083	.	+	.	ID=Dca3247.1.exon3;Parent=Dca3247.1
scaffold1115	Augus-PASA	exon	47184	47357	.	+	.	ID=Dca3247.1.exon4;Parent=Dca3247.1
scaffold1115	Augus-PASA	exon	47456	47563	.	+	.	ID=Dca3247.1.exon5;Parent=Dca3247.1
scaffold1115	Augus-PASA	exon	47685	47945	.	+	.	ID=Dca3247.1.exon6;Parent=Dca3247.1