Carnation DB

Dca3248.1

Annotation

9-exons
f-1
sp|F6GU78_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_06s0004g08180#GO:0003743#1F0P0C
AT5G20920.1 | Symbols: EIF2 BETA, EMB1401 | eukaryotic translation initiation factor 2 beta subunit | chr5:7094994-7096661 REVERSE LENGTH=268
Repeat List (scaffold1115)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3248.1	8	267	267	72.65	260	75	1e-104
Target_name	Start	End	Length	Cov(%)
sp\|F6GU78_VITVI	11	268	269	95.91

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3248.1	4	264	267	71.16	261	72	3e-100
Target_name	Start	End	Length	Cov(%)
AT5G20920.1	2	266	268	98.88

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1115	Augustus	mRNA	48761	55081	.	-	.	ID=Dca3248.1;Parent=Dca3248
scaffold1115	Augustus	exon	48761	48835	.	-	.	ID=Dca3248.1.exon1;Parent=Dca3248.1
scaffold1115	Augustus	exon	51424	51509	.	-	.	ID=Dca3248.1.exon2;Parent=Dca3248.1
scaffold1115	Augustus	exon	51942	52084	.	-	.	ID=Dca3248.1.exon3;Parent=Dca3248.1
scaffold1115	Augustus	exon	52764	52909	.	-	.	ID=Dca3248.1.exon4;Parent=Dca3248.1
scaffold1115	Augustus	exon	53638	53735	.	-	.	ID=Dca3248.1.exon5;Parent=Dca3248.1
scaffold1115	Augustus	exon	53835	53889	.	-	.	ID=Dca3248.1.exon6;Parent=Dca3248.1
scaffold1115	Augustus	exon	53974	54029	.	-	.	ID=Dca3248.1.exon7;Parent=Dca3248.1
scaffold1115	Augustus	exon	54147	54255	.	-	.	ID=Dca3248.1.exon8;Parent=Dca3248.1
scaffold1115	Augustus	exon	55046	55081	.	-	.	ID=Dca3248.1.exon9;Parent=Dca3248.1