Carnation DB

Dca32507.1

Annotation

17-exons
f-1
sp|F6H3J1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_04s0008g05880#GO:0005634;GO:0005524;GO:0003677;GO:0004386;GO:0005506;GO:0008270#5F0P1C
AT2G25170.1 | Symbols: PKL, GYM, CHD3, CHR6, SSL2 | chromatin remodeling factor CHD3 (PICKLE) | chr2:10714411-10723763 FORWARD LENGTH=1384
Repeat List (scaffold33)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca32507.1	11	749	755	62.64	739	63	0
Target_name	Start	End	Length	Cov(%)
sp\|F6H3J1_VITVI	631	1390	1472	51.63

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca32507.1	25	747	755	54.43	723	57	0
Target_name	Start	End	Length	Cov(%)
AT2G25170.1	630	1350	1384	52.09

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold33	Augustus	mRNA	30065	38389	.	+	.	ID=Dca32507.1;Parent=Dca32507
scaffold33	Augustus	exon	30065	30093	.	+	.	ID=Dca32507.1.exon1;Parent=Dca32507.1
scaffold33	Augustus	exon	30587	30811	.	+	.	ID=Dca32507.1.exon2;Parent=Dca32507.1
scaffold33	Augustus	exon	31003	31069	.	+	.	ID=Dca32507.1.exon3;Parent=Dca32507.1
scaffold33	Augustus	exon	31860	31982	.	+	.	ID=Dca32507.1.exon4;Parent=Dca32507.1
scaffold33	Augustus	exon	32438	32544	.	+	.	ID=Dca32507.1.exon5;Parent=Dca32507.1
scaffold33	Augustus	exon	32652	32733	.	+	.	ID=Dca32507.1.exon6;Parent=Dca32507.1
scaffold33	Augustus	exon	32961	33155	.	+	.	ID=Dca32507.1.exon7;Parent=Dca32507.1
scaffold33	Augustus	exon	33949	34099	.	+	.	ID=Dca32507.1.exon8;Parent=Dca32507.1
scaffold33	Augustus	exon	34188	34290	.	+	.	ID=Dca32507.1.exon9;Parent=Dca32507.1
scaffold33	Augus-PASA	exon	34438	34512	.	+	.	ID=Dca32507.1.exon10;Parent=Dca32507.1
scaffold33	Augus-PASA	exon	35528	35589	.	+	.	ID=Dca32507.1.exon11;Parent=Dca32507.1
scaffold33	Augus-PASA	exon	35674	35750	.	+	.	ID=Dca32507.1.exon12;Parent=Dca32507.1
scaffold33	Augus-PASA	exon	36047	36177	.	+	.	ID=Dca32507.1.exon13;Parent=Dca32507.1
scaffold33	Augus-PASA	exon	36628	36973	.	+	.	ID=Dca32507.1.exon14;Parent=Dca32507.1
scaffold33	Augus-PASA	exon	37576	37708	.	+	.	ID=Dca32507.1.exon15;Parent=Dca32507.1
scaffold33	Augus-PASA	exon	37887	37960	.	+	.	ID=Dca32507.1.exon16;Parent=Dca32507.1
scaffold33	Augus-PASA	exon	38102	38389	.	+	.	ID=Dca32507.1.exon17;Parent=Dca32507.1