Carnation DB

Dca32524.1

Annotation

5-exons
f-1
sp|F6H3V2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_04s0008g06130#GO:0005634;GO:0043565;GO:0003700#2F0P1C
sp|A5Y4G8_MEDTR#Class II KNOX homeobox transcription factor#Medicago truncatula (Barrel medic) (Medicago tribuloides)#Name=KNOX3#GO:0005634;GO:0043565;GO:0003700#2F0P1C
Repeat List (scaffold33)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca32524.1	27	374	374	70.05	348	70	7e-145
Target_name	Start	End	Length	Cov(%)
sp\|F6H3V2_VITVI	46	414	427	86.41

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca32524.1	46	374	374	66.84	329	76	2e-139
Target_name	Start	End	Length	Cov(%)
AT5G25220.1	108	418	431	72.15

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold33	Augus-PASA	mRNA	176755	180590	.	+	.	ID=Dca32524.1;Parent=Dca32524
scaffold33	Augus-PASA	exon	176755	177291	.	+	.	ID=Dca32524.1.exon1;Parent=Dca32524.1
scaffold33	Augus-PASA	exon	179534	179654	.	+	.	ID=Dca32524.1.exon2;Parent=Dca32524.1
scaffold33	Augustus	exon	179790	179986	.	+	.	ID=Dca32524.1.exon3;Parent=Dca32524.1
scaffold33	Augustus	exon	180083	180214	.	+	.	ID=Dca32524.1.exon4;Parent=Dca32524.1
scaffold33	Augustus	exon	180454	180590	.	+	.	ID=Dca32524.1.exon5;Parent=Dca32524.1