Carnation DB

Dca3270.1

Annotation

9-exons
f-1
sp|F6HEE2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_16s0039g01690#GO:0032040;GO:0006364#0F1P1C
AT5G16750.1 | Symbols: TOZ | Transducin family protein / WD-40 repeat family protein | chr5:5504541-5509266 REVERSE LENGTH=876
Repeat List (scaffold1116)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3270.1	26	455	455	67.69	430	69	5e-178
Target_name	Start	End	Length	Cov(%)
sp\|F6HEE2_VITVI	298	748	900	50.11

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3270.1	7	455	455	61.75	449	60	2e-163
Target_name	Start	End	Length	Cov(%)
AT5G16750.1	270	738	876	53.53

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1116	Augustus	mRNA	28463	31834	.	-	.	ID=Dca3270.1;Parent=Dca3270
scaffold1116	Augustus	exon	28463	28547	.	-	.	ID=Dca3270.1.exon1;Parent=Dca3270.1
scaffold1116	Augustus	exon	28634	28764	.	-	.	ID=Dca3270.1.exon2;Parent=Dca3270.1
scaffold1116	Augustus	exon	28985	29104	.	-	.	ID=Dca3270.1.exon3;Parent=Dca3270.1
scaffold1116	Augustus	exon	29455	29531	.	-	.	ID=Dca3270.1.exon4;Parent=Dca3270.1
scaffold1116	Augustus	exon	29696	29942	.	-	.	ID=Dca3270.1.exon5;Parent=Dca3270.1
scaffold1116	Augustus	exon	30295	30451	.	-	.	ID=Dca3270.1.exon6;Parent=Dca3270.1
scaffold1116	Augustus	exon	30858	30944	.	-	.	ID=Dca3270.1.exon7;Parent=Dca3270.1
scaffold1116	Augustus	exon	31271	31374	.	-	.	ID=Dca3270.1.exon8;Parent=Dca3270.1
scaffold1116	Augustus	exon	31475	31834	.	-	.	ID=Dca3270.1.exon9;Parent=Dca3270.1