Carnation DB

Dca32734.1

Annotation

9-exons
f-1
sp|F6I6P3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_11s0078g00250#GO:0016779;GO:0009058#1F1P0C
Os10t0387000-01 Similar to Choline phosphate cytidylyltransferase-like protein (Fragment).
Repeat List (scaffold332)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca32734.1	1	422	422	74.17	422	73	0
Target_name	Start	End	Length	Cov(%)
sp\|F6I6P3_VITVI	1	431	431	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca32734.1	1	422	422	68.95	422	68	2e-167
Target_name	Start	End	Length	Cov(%)
Os08t0224800-01	6	430	431	98.6

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold332	Augus-PASA	mRNA	50712	54472	.	-	.	ID=Dca32734.1;Parent=Dca32734
scaffold332	Augus-PASA	exon	50712	50783	.	-	.	ID=Dca32734.1.exon1;Parent=Dca32734.1
scaffold332	Augus-PASA	exon	50870	50992	.	-	.	ID=Dca32734.1.exon2;Parent=Dca32734.1
scaffold332	Augus-PASA	exon	51086	51151	.	-	.	ID=Dca32734.1.exon3;Parent=Dca32734.1
scaffold332	Augus-PASA	exon	51719	51839	.	-	.	ID=Dca32734.1.exon4;Parent=Dca32734.1
scaffold332	Augus-PASA	exon	52292	52359	.	-	.	ID=Dca32734.1.exon5;Parent=Dca32734.1
scaffold332	Augus-PASA	exon	53165	53236	.	-	.	ID=Dca32734.1.exon6;Parent=Dca32734.1
scaffold332	Augus-PASA	exon	53411	53568	.	-	.	ID=Dca32734.1.exon7;Parent=Dca32734.1
scaffold332	Augus-PASA	exon	53808	54043	.	-	.	ID=Dca32734.1.exon8;Parent=Dca32734.1
scaffold332	Augustus	exon	54120	54472	.	-	.	ID=Dca32734.1.exon9;Parent=Dca32734.1