Carnation DB

Dca32750.1

Annotation

6-exons
f-1
sp|B9T3X7_RICCO#Alanine transaminase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0417600#GO:0004021#1F0P0C
Repeat List (scaffold3320)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca32750.1	1	150	181	53.03	150	61	5e-42
Target_name	Start	End	Length	Cov(%)
sp\|B9T3X7_RICCO	1	151	170	88.82

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca32750.1	1	140	181	48.06	140	59	3e-37
Target_name	Start	End	Length	Cov(%)
AT1G72330.3	1	147	553	26.58

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3320	Augustus	mRNA	33079	35281	.	+	.	ID=Dca32750.1;Parent=Dca32750
scaffold3320	Augustus	exon	33079	33270	.	+	.	ID=Dca32750.1.exon1;Parent=Dca32750.1
scaffold3320	Augustus	exon	33927	33977	.	+	.	ID=Dca32750.1.exon2;Parent=Dca32750.1
scaffold3320	Augustus	exon	34314	34364	.	+	.	ID=Dca32750.1.exon3;Parent=Dca32750.1
scaffold3320	Augustus	exon	34713	34778	.	+	.	ID=Dca32750.1.exon4;Parent=Dca32750.1
scaffold3320	Augustus	exon	34865	34926	.	+	.	ID=Dca32750.1.exon5;Parent=Dca32750.1
scaffold3320	Augustus	exon	35158	35281	.	+	.	ID=Dca32750.1.exon6;Parent=Dca32750.1