Carnation DB

Dca3278.1

Annotation

5-exons
f-3
sp|B9MZ18_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_595025#unknown#0F0P0C
sp|G7J4U7_MEDTR#Galactinol-sucrose galactosyltransferase#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_3g077280#GO:0016757#1F0P0C
Repeat List (scaffold11162)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3278.1	1	455	554	57.22	455	60	0
Target_name	Start	End	Length	Cov(%)
sp\|B9MZ18_POPTR	208	733	775	67.87

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3278.1	369	473	554	8.66	105	46	4e-16
Target_name	Start	End	Length	Cov(%)
AT5G40390.1	660	760	783	12.89

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold11162	Augustus	mRNA	259	4195	.	+	.	ID=Dca3278.1;Parent=Dca3278
scaffold11162	Augustus	exon	259	848	.	+	.	ID=Dca3278.1.exon1;Parent=Dca3278.1
scaffold11162	Augustus	exon	2242	2419	.	+	.	ID=Dca3278.1.exon2;Parent=Dca3278.1
scaffold11162	Augustus	exon	2591	2937	.	+	.	ID=Dca3278.1.exon3;Parent=Dca3278.1
scaffold11162	Augustus	exon	3229	3484	.	+	.	ID=Dca3278.1.exon4;Parent=Dca3278.1
scaffold11162	Augustus	exon	3900	4195	.	+	.	ID=Dca3278.1.exon5;Parent=Dca3278.1