Carnation DB

Dca32823.1

Annotation

6-exons
f-1
sp|D7TJC2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_10s0003g00080#GO:0008270#1F0P0C
Os05t0497600-01 Similar to ribosomal protein L11 methyltransferase containing protein.
Repeat List (scaffold333)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca32823.1	4	326	329	55.62	323	53	3e-82
Target_name	Start	End	Length	Cov(%)
sp\|D7TJC2_VITVI	96	430	433	77.36

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca32823.1	4	326	329	44.68	323	42	3e-58
Target_name	Start	End	Length	Cov(%)
Os05t0497600-01	147	485	489	69.32

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold333	Augus-PASA	mRNA	128793	130963	.	+	.	ID=Dca32823.1;Parent=Dca32823
scaffold333	Augus-PASA	exon	128793	128921	.	+	.	ID=Dca32823.1.exon1;Parent=Dca32823.1
scaffold333	Augus-PASA	exon	129047	129088	.	+	.	ID=Dca32823.1.exon2;Parent=Dca32823.1
scaffold333	Augus-PASA	exon	129395	129862	.	+	.	ID=Dca32823.1.exon3;Parent=Dca32823.1
scaffold333	Augus-PASA	exon	130168	130272	.	+	.	ID=Dca32823.1.exon4;Parent=Dca32823.1
scaffold333	Augus-PASA	exon	130370	130582	.	+	.	ID=Dca32823.1.exon5;Parent=Dca32823.1
scaffold333	Augus-PASA	exon	130931	130963	.	+	.	ID=Dca32823.1.exon6;Parent=Dca32823.1