Carnation DB

Dca32830.1

Annotation

10-exons
f-1
sp|D7SN59_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_06s0061g01240#GO:0005622;GO:0008270#1F0P1C
sp|B9HQL3_POPTR#Histone deacetylase#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#Name=HDT901#GO:0003676;GO:0008270#2F0P0C
Repeat List (scaffold3330)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca32830.1	6	292	293	44.7	287	38	3e-31
Target_name	Start	End	Length	Cov(%)
sp\|D7SN59_VITVI	3	352	353	99.15

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca32830.1	6	292	293	35.83	287	33	2e-22
Target_name	Start	End	Length	Cov(%)
AT5G03740.1	3	292	294	98.63

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3330	Augustus	mRNA	23315	26867	.	+	.	ID=Dca32830.1;Parent=Dca32830
scaffold3330	Augustus	exon	23315	23336	.	+	.	ID=Dca32830.1.exon1;Parent=Dca32830.1
scaffold3330	Augustus	exon	24579	24649	.	+	.	ID=Dca32830.1.exon2;Parent=Dca32830.1
scaffold3330	Augustus	exon	24741	25014	.	+	.	ID=Dca32830.1.exon3;Parent=Dca32830.1
scaffold3330	Augustus	exon	25126	25131	.	+	.	ID=Dca32830.1.exon4;Parent=Dca32830.1
scaffold3330	Augustus	exon	25221	25268	.	+	.	ID=Dca32830.1.exon5;Parent=Dca32830.1
scaffold3330	Augustus	exon	25347	25492	.	+	.	ID=Dca32830.1.exon6;Parent=Dca32830.1
scaffold3330	Augustus	exon	25916	25984	.	+	.	ID=Dca32830.1.exon7;Parent=Dca32830.1
scaffold3330	Augustus	exon	26068	26158	.	+	.	ID=Dca32830.1.exon8;Parent=Dca32830.1
scaffold3330	Augustus	exon	26622	26715	.	+	.	ID=Dca32830.1.exon9;Parent=Dca32830.1
scaffold3330	Augustus	exon	26807	26867	.	+	.	ID=Dca32830.1.exon10;Parent=Dca32830.1