Dca32857.1
Annotation
- 3-exons
- f-1
- sp|Q9FZN9_ARATH#Retroelement pol polyprotein-like#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P0C
- Repeat List (scaffold3336)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca32857.1 |
1 |
979 |
980 |
62.75 |
979 |
58 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9FZN9_ARATH |
700 |
1774 |
1864 |
57.67 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca32857.1 |
191 |
923 |
980 |
24.38 |
733 |
31 |
7e-81
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
580 |
1287 |
1539 |
46 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3336 |
Augustus |
mRNA |
1809 |
4952 |
. |
- |
. |
ID=Dca32857.1;Parent=Dca32857 |
| scaffold3336 |
Augustus |
exon |
1809 |
3092 |
. |
- |
. |
ID=Dca32857.1.exon1;Parent=Dca32857.1 |
| scaffold3336 |
Augustus |
exon |
3176 |
4379 |
. |
- |
. |
ID=Dca32857.1.exon2;Parent=Dca32857.1 |
| scaffold3336 |
Augustus |
exon |
4498 |
4952 |
. |
- |
. |
ID=Dca32857.1.exon3;Parent=Dca32857.1 |
