Dca3287.1
Annotation
- 3-exons
- f-1
- sp|B9HIJ8_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_765880#GO:0005507;GO:0003676;GO:0048038;GO:0008270;GO:0009308#4F1P0C
- AT5G49930.1 | Symbols: emb1441 | zinc knuckle (CCHC-type) family protein | chr5:20308260-20312736 REVERSE LENGTH=1080
- Repeat List (scaffold1117)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3287.1 |
35 |
126 |
126 |
56.34 |
92 |
78 |
7e-31
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9HIJ8_POPTR |
705 |
796 |
796 |
11.55 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3287.1 |
14 |
109 |
126 |
46.03 |
96 |
60 |
1e-29
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G49930.1 |
966 |
1062 |
1080 |
8.98 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1117 |
Augustus |
mRNA |
4383 |
7225 |
. |
+ |
. |
ID=Dca3287.1;Parent=Dca3287 |
| scaffold1117 |
Augustus |
exon |
4383 |
4455 |
. |
+ |
. |
ID=Dca3287.1.exon1;Parent=Dca3287.1 |
| scaffold1117 |
Augustus |
exon |
6481 |
6594 |
. |
+ |
. |
ID=Dca3287.1.exon2;Parent=Dca3287.1 |
| scaffold1117 |
Augustus |
exon |
7032 |
7225 |
. |
+ |
. |
ID=Dca3287.1.exon3;Parent=Dca3287.1 |
