Carnation DB

Dca32898.1

Annotation

9-exons
f-1
sp|D7UBZ2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_03s0180g00270#GO:0009982;GO:0003723;GO:0001522#2F1P0C
sp|B9RY90_RICCO#Ribosomal pseudouridine synthase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0811340#GO:0003796;GO:0009982;GO:0003723;GO:0001522#3F1P0C
Repeat List (scaffold334)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca32898.1	24	449	470	54.89	426	57	8e-138
Target_name	Start	End	Length	Cov(%)
sp\|D7UBZ2_VITVI	35	476	476	92.85

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca32898.1	7	449	470	51.06	443	51	2e-117
Target_name	Start	End	Length	Cov(%)
AT3G19440.1	11	469	477	96.22

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold334	Augustus	mRNA	129274	133034	.	-	.	ID=Dca32898.1;Parent=Dca32898
scaffold334	Augustus	exon	129274	129687	.	-	.	ID=Dca32898.1.exon1;Parent=Dca32898.1
scaffold334	Augustus	exon	130011	130057	.	-	.	ID=Dca32898.1.exon2;Parent=Dca32898.1
scaffold334	Augustus	exon	130320	130425	.	-	.	ID=Dca32898.1.exon3;Parent=Dca32898.1
scaffold334	Augustus	exon	130547	130651	.	-	.	ID=Dca32898.1.exon4;Parent=Dca32898.1
scaffold334	Augustus	exon	130764	130877	.	-	.	ID=Dca32898.1.exon5;Parent=Dca32898.1
scaffold334	Augustus	exon	131306	131386	.	-	.	ID=Dca32898.1.exon6;Parent=Dca32898.1
scaffold334	Augustus	exon	131503	131550	.	-	.	ID=Dca32898.1.exon7;Parent=Dca32898.1
scaffold334	Augustus	exon	131638	131778	.	-	.	ID=Dca32898.1.exon8;Parent=Dca32898.1
scaffold334	Augustus	exon	132678	133034	.	-	.	ID=Dca32898.1.exon9;Parent=Dca32898.1