Dca3291.1
Annotation
- 3-exons
- f-1
- sp|F4NCG3_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Os06t0484800-00 Reverse transcriptase domain containing protein.
- Repeat List (scaffold1117)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3291.1 |
367 |
1442 |
1453 |
27.18 |
1076 |
36 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F4NCG3_BETVU |
3 |
1112 |
1114 |
99.64 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3291.1 |
449 |
1243 |
1453 |
16.44 |
795 |
30 |
1e-93
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0484800-00 |
8 |
794 |
857 |
91.83 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1117 |
Augustus |
mRNA |
38001 |
42552 |
. |
- |
. |
ID=Dca3291.1;Parent=Dca3291 |
| scaffold1117 |
Augustus |
exon |
38001 |
38572 |
. |
- |
. |
ID=Dca3291.1.exon1;Parent=Dca3291.1 |
| scaffold1117 |
Augustus |
exon |
38660 |
41390 |
. |
- |
. |
ID=Dca3291.1.exon2;Parent=Dca3291.1 |
| scaffold1117 |
Augustus |
exon |
41494 |
42552 |
. |
- |
. |
ID=Dca3291.1.exon3;Parent=Dca3291.1 |
