Carnation DB

Dca32922.1

Annotation

7-exons
f-1
sp|B9HLX7_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1084331#unknown#0F0P0C
AT3G55510.1 | Symbols: RBL | Noc2p family | chr3:20579232-20582124 FORWARD LENGTH=594
Repeat List (scaffold3342)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca32922.1	2	424	457	49.89	423	54	1e-135
Target_name	Start	End	Length	Cov(%)
sp\|B9HLX7_POPTR	188	610	624	67.78

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca32922.1	2	394	457	41.79	393	49	5e-108
Target_name	Start	End	Length	Cov(%)
AT3G55510.1	193	585	594	66.16

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3342	Augustus	mRNA	3779	6865	.	+	.	ID=Dca32922.1;Parent=Dca32922
scaffold3342	Augustus	exon	3779	3976	.	+	.	ID=Dca32922.1.exon1;Parent=Dca32922.1
scaffold3342	Augustus	exon	4217	4516	.	+	.	ID=Dca32922.1.exon2;Parent=Dca32922.1
scaffold3342	Augustus	exon	4831	5154	.	+	.	ID=Dca32922.1.exon3;Parent=Dca32922.1
scaffold3342	Augustus	exon	5668	5874	.	+	.	ID=Dca32922.1.exon4;Parent=Dca32922.1
scaffold3342	Augustus	exon	5976	6065	.	+	.	ID=Dca32922.1.exon5;Parent=Dca32922.1
scaffold3342	Augustus	exon	6150	6247	.	+	.	ID=Dca32922.1.exon6;Parent=Dca32922.1
scaffold3342	Augustus	exon	6709	6865	.	+	.	ID=Dca32922.1.exon7;Parent=Dca32922.1