Carnation DB

Dca32962.1

Annotation

7-exons
f-1
sp|B9HRS7_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_821209#GO:0008270#1F0P0C
AT4G34370.1 | Symbols: ATARI1, ARI1 | RING/U-box superfamily protein | chr4:16434547-16437037 FORWARD LENGTH=597
Repeat List (scaffold3349)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca32962.1	2	617	617	61.1	616	61	0
Target_name	Start	End	Length	Cov(%)
sp\|B9HRS7_POPTR	5	591	591	99.32

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca32962.1	1	617	617	59.31	617	59	0
Target_name	Start	End	Length	Cov(%)
AT4G34370.1	1	597	597	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3349	Augustus	mRNA	15444	21152	.	+	.	ID=Dca32962.1;Parent=Dca32962
scaffold3349	Augustus	exon	15444	15602	.	+	.	ID=Dca32962.1.exon1;Parent=Dca32962.1
scaffold3349	Augustus	exon	16427	16459	.	+	.	ID=Dca32962.1.exon2;Parent=Dca32962.1
scaffold3349	Augustus	exon	17012	17285	.	+	.	ID=Dca32962.1.exon3;Parent=Dca32962.1
scaffold3349	Augustus	exon	18124	18604	.	+	.	ID=Dca32962.1.exon4;Parent=Dca32962.1
scaffold3349	Augus-PASA	exon	19686	20231	.	+	.	ID=Dca32962.1.exon5;Parent=Dca32962.1
scaffold3349	Augus-PASA	exon	20442	20584	.	+	.	ID=Dca32962.1.exon6;Parent=Dca32962.1
scaffold3349	Augus-PASA	exon	20935	21152	.	+	.	ID=Dca32962.1.exon7;Parent=Dca32962.1