Carnation DB

Dca3311.1

Annotation

9-exons
f-1
sp|B9HCW1_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_801999#GO:0016021;GO:0005743;GO:0005488#1F0P2C
AT3G51870.1 | Symbols: | Mitochondrial substrate carrier family protein | chr3:19243978-19246611 FORWARD LENGTH=381
Repeat List (scaffold1118)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3311.1	4	352	361	71.19	349	68	3e-137
Target_name	Start	End	Length	Cov(%)
sp\|B9HCW1_POPTR	5	383	393	96.43

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3311.1	1	352	361	67.86	352	65	1e-131
Target_name	Start	End	Length	Cov(%)
AT3G51870.1	1	377	381	98.95

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1118	Augustus	mRNA	26862	33560	.	+	.	ID=Dca3311.1;Parent=Dca3311
scaffold1118	Augustus	exon	26862	27191	.	+	.	ID=Dca3311.1.exon1;Parent=Dca3311.1
scaffold1118	Augustus	exon	29793	29849	.	+	.	ID=Dca3311.1.exon2;Parent=Dca3311.1
scaffold1118	Augustus	exon	30976	31038	.	+	.	ID=Dca3311.1.exon3;Parent=Dca3311.1
scaffold1118	Augustus	exon	31321	31404	.	+	.	ID=Dca3311.1.exon4;Parent=Dca3311.1
scaffold1118	Augustus	exon	31996	32064	.	+	.	ID=Dca3311.1.exon5;Parent=Dca3311.1
scaffold1118	Augustus	exon	32148	32260	.	+	.	ID=Dca3311.1.exon6;Parent=Dca3311.1
scaffold1118	Augustus	exon	32375	32544	.	+	.	ID=Dca3311.1.exon7;Parent=Dca3311.1
scaffold1118	Augustus	exon	32863	32941	.	+	.	ID=Dca3311.1.exon8;Parent=Dca3311.1
scaffold1118	Augustus	exon	33440	33560	.	+	.	ID=Dca3311.1.exon9;Parent=Dca3311.1