Carnation DB

Dca33389.1

Annotation

5-exons
f-1
sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
Os09t0122300-01 Similar to Zinc knuckle family protein.
Repeat List (scaffold3406)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca33389.1	196	836	844	37.08	641	46	3e-151
Target_name	Start	End	Length	Cov(%)
sp\|E2DN01_BETVU	9	658	1717	37.85

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca33389.1	680	772	844	4.38	93	39	5e-11
Target_name	Start	End	Length	Cov(%)
Os12t0292200-01	98	189	192	47.91

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3406	Augustus	mRNA	23796	27883	.	+	.	ID=Dca33389.1;Parent=Dca33389
scaffold3406	Augustus	exon	23796	24038	.	+	.	ID=Dca33389.1.exon1;Parent=Dca33389.1
scaffold3406	Augustus	exon	24285	24507	.	+	.	ID=Dca33389.1.exon2;Parent=Dca33389.1
scaffold3406	Augustus	exon	25628	26177	.	+	.	ID=Dca33389.1.exon3;Parent=Dca33389.1
scaffold3406	Augustus	exon	26301	27123	.	+	.	ID=Dca33389.1.exon4;Parent=Dca33389.1
scaffold3406	Augustus	exon	27188	27883	.	+	.	ID=Dca33389.1.exon5;Parent=Dca33389.1