Carnation DB

Dca3344.1

Annotation

11-exons
f-1
sp|B9T6Z8_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_1143360#unknown#0F0P0C
AT1G23230.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med23 (InterPro:IPR021629); Has 187 Blast hits to 184 proteins in 67 species: Archae - 0; Bacteria - 0; Metazoa - 135; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). | chr1:8244481-8251741 FORWARD LENGTH=1615
Repeat List (scaffold1119)

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3344.1	7	674	700	65	668	61	0
Target_name	Start	End	Length	Cov(%)
sp\|B9T6Z8_RICCO	52	753	1613	43.52

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3344.1	4	674	700	59.42	671	55	0
Target_name	Start	End	Length	Cov(%)
AT1G23230.1	49	754	1615	43.71

seqname	source	feature	start	end	score	strand	frame	group
scaffold1119	Augustus	mRNA	132229	142411	.	+	.	ID=Dca3344.1;Parent=Dca3344
scaffold1119	Augustus	exon	132229	132245	.	+	.	ID=Dca3344.1.exon1;Parent=Dca3344.1
scaffold1119	Augustus	exon	133736	133832	.	+	.	ID=Dca3344.1.exon2;Parent=Dca3344.1
scaffold1119	Augustus	exon	134011	134158	.	+	.	ID=Dca3344.1.exon3;Parent=Dca3344.1
scaffold1119	Augustus	exon	134272	134933	.	+	.	ID=Dca3344.1.exon4;Parent=Dca3344.1
scaffold1119	Augustus	exon	136039	136210	.	+	.	ID=Dca3344.1.exon5;Parent=Dca3344.1
scaffold1119	Augustus	exon	137350	137567	.	+	.	ID=Dca3344.1.exon6;Parent=Dca3344.1
scaffold1119	Augustus	exon	137861	138058	.	+	.	ID=Dca3344.1.exon7;Parent=Dca3344.1
scaffold1119	Augustus	exon	138508	138655	.	+	.	ID=Dca3344.1.exon8;Parent=Dca3344.1
scaffold1119	Augustus	exon	139508	139785	.	+	.	ID=Dca3344.1.exon9;Parent=Dca3344.1
scaffold1119	Augustus	exon	140922	141005	.	+	.	ID=Dca3344.1.exon10;Parent=Dca3344.1
scaffold1119	Augustus	exon	142331	142411	.	+	.	ID=Dca3344.1.exon11;Parent=Dca3344.1