Dca33530.1
Annotation
- 2-exons
- f-1
- sp|Q8S749_ORYSJ#Putative retroelement#Oryza sativa subsp japonica (Rice)#Name=OSJNBb0081F12.19#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold3424)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca33530.1 |
23 |
69 |
69 |
50.72 |
47 |
75 |
8e-16
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|G9FIF2_BETVU |
1289 |
1335 |
1553 |
3.02 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca33530.1 |
38 |
68 |
69 |
31.88 |
31 |
71 |
7e-09
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os03t0627900-01 |
9 |
39 |
230 |
13.47 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3424 |
Augustus |
mRNA |
43647 |
45803 |
. |
+ |
. |
ID=Dca33530.1;Parent=Dca33530 |
| scaffold3424 |
Augustus |
exon |
43647 |
44606 |
. |
+ |
. |
ID=Dca33530.1.exon1;Parent=Dca33530.1 |
| scaffold3424 |
Augustus |
exon |
44700 |
45803 |
. |
+ |
. |
ID=Dca33530.1.exon2;Parent=Dca33530.1 |
