Dca33553.1
Annotation
- 4-exons
- f-1
- sp|D7KBH9_ARALL#Ribosomal protein L18 family protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_471582#GO:0005840;GO:0003735;GO:0006412#1F1P1C
- Repeat List (scaffold3427)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca33553.1 |
25 |
107 |
115 |
44.34 |
83 |
62 |
1e-19
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D7KBH9_ARALL |
42 |
118 |
221 |
34.84 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca33553.1 |
28 |
82 |
115 |
35.65 |
55 |
75 |
9e-19
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G14205.1 |
46 |
100 |
165 |
33.33 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3427 |
Augustus |
mRNA |
16637 |
20045 |
. |
+ |
. |
ID=Dca33553.1;Parent=Dca33553 |
| scaffold3427 |
Augustus |
exon |
16637 |
16665 |
. |
+ |
. |
ID=Dca33553.1.exon1;Parent=Dca33553.1 |
| scaffold3427 |
Augustus |
exon |
18620 |
18626 |
. |
+ |
. |
ID=Dca33553.1.exon2;Parent=Dca33553.1 |
| scaffold3427 |
Augustus |
exon |
18718 |
18819 |
. |
+ |
. |
ID=Dca33553.1.exon3;Parent=Dca33553.1 |
| scaffold3427 |
Augustus |
exon |
19836 |
20045 |
. |
+ |
. |
ID=Dca33553.1.exon4;Parent=Dca33553.1 |
