Dca33560.1
Annotation
- 3-exons
- f-1
- sp|A5BSC1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_030567#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Os11t0656500-01 Integrase, catalytic core domain containing protein.
- Repeat List (scaffold34280)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca33560.1 |
1 |
193 |
204 |
69.11 |
193 |
67 |
6e-78
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5BSC1_VITVI |
1423 |
1635 |
2203 |
9.66 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca33560.1 |
109 |
201 |
204 |
17.15 |
93 |
38 |
3e-11
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1113 |
1206 |
1401 |
6.7 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold34280 |
Augustus |
mRNA |
1 |
954 |
. |
+ |
. |
ID=Dca33560.1;Parent=Dca33560 |
| scaffold34280 |
Augustus |
exon |
1 |
325 |
. |
+ |
. |
ID=Dca33560.1.exon1;Parent=Dca33560.1 |
| scaffold34280 |
Augustus |
exon |
529 |
782 |
. |
+ |
. |
ID=Dca33560.1.exon2;Parent=Dca33560.1 |
| scaffold34280 |
Augustus |
exon |
919 |
954 |
. |
+ |
. |
ID=Dca33560.1.exon3;Parent=Dca33560.1 |
