Dca3357.1
Annotation
- 2-exons
- f-2
- sp|H2KWP6_ORYSJ#Retrotransposon protein, putative, Ty1-copia subclass#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os12g25734#unknown#0F0P0C
- Repeat List (scaffold11198)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3357.1 |
15 |
331 |
333 |
53.75 |
317 |
51 |
9e-98
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|H2KWP6_ORYSJ |
446 |
776 |
932 |
35.51 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3357.1 |
32 |
330 |
333 |
36.93 |
299 |
34 |
9e-52
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
902 |
1259 |
1428 |
25.07 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold11198 |
Augustus |
mRNA |
1 |
1215 |
. |
+ |
. |
ID=Dca3357.1;Parent=Dca3357 |
| scaffold11198 |
Augustus |
exon |
1 |
702 |
. |
+ |
. |
ID=Dca3357.1.exon1;Parent=Dca3357.1 |
| scaffold11198 |
Augustus |
exon |
915 |
1215 |
. |
+ |
. |
ID=Dca3357.1.exon2;Parent=Dca3357.1 |
