Dca33580.1
Annotation
- 2-exons
- f-1
- sp|D3IVU0_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold3430)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca33580.1 |
1 |
134 |
164 |
61.58 |
134 |
76 |
3e-55
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVU0_9POAL |
669 |
802 |
896 |
14.95 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca33580.1 |
6 |
133 |
164 |
31.09 |
128 |
40 |
5e-20
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1177 |
1303 |
1401 |
9.06 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3430 |
Augustus |
mRNA |
18374 |
18954 |
. |
- |
. |
ID=Dca33580.1;Parent=Dca33580 |
| scaffold3430 |
Augustus |
exon |
18374 |
18468 |
. |
- |
. |
ID=Dca33580.1.exon1;Parent=Dca33580.1 |
| scaffold3430 |
Augustus |
exon |
18555 |
18954 |
. |
- |
. |
ID=Dca33580.1.exon2;Parent=Dca33580.1 |
