Carnation DB

Dca33667.1

Annotation

9-exons
f-1
sp|B9N1K5_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_827628#unknown#0F0P0C
AT4G27430.1 | Symbols: CIP7 | COP1-interacting protein 7 | chr4:13718817-13722736 FORWARD LENGTH=1058
Repeat List (scaffold3442)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca33667.1	1	917	927	48.11	917	47	0
Target_name	Start	End	Length	Cov(%)
sp\|B9N1K5_POPTR	1	925	1118	82.73

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca33667.1	1	915	927	43.79	915	44	7e-170
Target_name	Start	End	Length	Cov(%)
AT4G27430.1	1	848	1058	80.15

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3442	Augustus	mRNA	7184	13137	.	+	.	ID=Dca33667.1;Parent=Dca33667
scaffold3442	Augustus	exon	7184	7242	.	+	.	ID=Dca33667.1.exon1;Parent=Dca33667.1
scaffold3442	Augustus	exon	8162	8341	.	+	.	ID=Dca33667.1.exon2;Parent=Dca33667.1
scaffold3442	Augustus	exon	8633	8757	.	+	.	ID=Dca33667.1.exon3;Parent=Dca33667.1
scaffold3442	Augustus	exon	9244	9290	.	+	.	ID=Dca33667.1.exon4;Parent=Dca33667.1
scaffold3442	Augustus	exon	9403	9455	.	+	.	ID=Dca33667.1.exon5;Parent=Dca33667.1
scaffold3442	Augustus	exon	9552	9704	.	+	.	ID=Dca33667.1.exon6;Parent=Dca33667.1
scaffold3442	Augustus	exon	9862	10100	.	+	.	ID=Dca33667.1.exon7;Parent=Dca33667.1
scaffold3442	Augustus	exon	10541	12195	.	+	.	ID=Dca33667.1.exon8;Parent=Dca33667.1
scaffold3442	Augustus	exon	12865	13137	.	+	.	ID=Dca33667.1.exon9;Parent=Dca33667.1