Dca3378.1
Annotation
- 3-exons
- f-1
- sp|B9HMD6_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_872530#unknown#0F0P0C
- AT3G06120.1 | Symbols: MUTE | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr3:1846531-1848016 FORWARD LENGTH=202
- Repeat List (scaffold112)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3378.1 |
1 |
186 |
192 |
65.1 |
186 |
67 |
1e-61
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9HMD6_POPTR |
14 |
196 |
206 |
88.83 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3378.1 |
1 |
190 |
192 |
58.85 |
190 |
59 |
5e-58
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G06120.1 |
14 |
196 |
202 |
90.59 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold112 |
Augustus |
mRNA |
105024 |
107724 |
. |
- |
. |
ID=Dca3378.1;Parent=Dca3378 |
| scaffold112 |
Augustus |
exon |
105024 |
105104 |
. |
- |
. |
ID=Dca3378.1.exon1;Parent=Dca3378.1 |
| scaffold112 |
Augustus |
exon |
105503 |
105943 |
. |
- |
. |
ID=Dca3378.1.exon2;Parent=Dca3378.1 |
| scaffold112 |
Augustus |
exon |
107668 |
107724 |
. |
- |
. |
ID=Dca3378.1.exon3;Parent=Dca3378.1 |
