Carnation DB

Dca33806.1

Annotation

11-exons
f-1
sp|B9GQW0_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_754037#GO:0003743#1F0P0C
AT2G45730.1 | Symbols: | eukaryotic initiation factor 3 gamma subunit family protein | chr2:18836519-18839123 REVERSE LENGTH=446
Repeat List (scaffold3463)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca33806.1	29	350	355	59.71	322	56	6e-108
Target_name	Start	End	Length	Cov(%)
sp\|B9GQW0_POPTR	12	386	387	96.89

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca33806.1	257	347	355	17.74	91	70	1e-34
Target_name	Start	End	Length	Cov(%)
AT2G45730.1	353	443	446	20.4

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3463	Augustus	mRNA	3479	14494	.	+	.	ID=Dca33806.1;Parent=Dca33806
scaffold3463	Augustus	exon	3479	3539	.	+	.	ID=Dca33806.1.exon1;Parent=Dca33806.1
scaffold3463	Augustus	exon	4723	4837	.	+	.	ID=Dca33806.1.exon2;Parent=Dca33806.1
scaffold3463	Augustus	exon	5239	5369	.	+	.	ID=Dca33806.1.exon3;Parent=Dca33806.1
scaffold3463	Augustus	exon	6039	6156	.	+	.	ID=Dca33806.1.exon4;Parent=Dca33806.1
scaffold3463	Augustus	exon	7136	7217	.	+	.	ID=Dca33806.1.exon5;Parent=Dca33806.1
scaffold3463	Augustus	exon	7293	7363	.	+	.	ID=Dca33806.1.exon6;Parent=Dca33806.1
scaffold3463	Augustus	exon	8991	9115	.	+	.	ID=Dca33806.1.exon7;Parent=Dca33806.1
scaffold3463	Augustus	exon	11034	11103	.	+	.	ID=Dca33806.1.exon8;Parent=Dca33806.1
scaffold3463	Augustus	exon	12414	12519	.	+	.	ID=Dca33806.1.exon9;Parent=Dca33806.1
scaffold3463	Augustus	exon	14192	14278	.	+	.	ID=Dca33806.1.exon10;Parent=Dca33806.1
scaffold3463	Augustus	exon	14393	14494	.	+	.	ID=Dca33806.1.exon11;Parent=Dca33806.1