Carnation DB

Dca33828.1

Annotation

9-exons
f-1
sp|B9HXN1_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_724085#unknown#0F0P0C
AT1G69400.1 | Symbols: | Transducin/WD40 repeat-like superfamily protein | chr1:26087027-26088806 FORWARD LENGTH=314
Repeat List (scaffold3468)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca33828.1	1	313	328	51.82	313	54	3e-93
Target_name	Start	End	Length	Cov(%)
sp\|B9HXN1_POPTR	1	319	334	95.5

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca33828.1	1	310	328	46.03	310	49	4e-79
Target_name	Start	End	Length	Cov(%)
AT1G69400.1	1	314	314	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3468	Augustus	mRNA	15869	22305	.	+	.	ID=Dca33828.1;Parent=Dca33828
scaffold3468	Augustus	exon	15869	15973	.	+	.	ID=Dca33828.1.exon1;Parent=Dca33828.1
scaffold3468	Augustus	exon	16070	16200	.	+	.	ID=Dca33828.1.exon2;Parent=Dca33828.1
scaffold3468	Augustus	exon	18369	18451	.	+	.	ID=Dca33828.1.exon3;Parent=Dca33828.1
scaffold3468	Augustus	exon	18648	18899	.	+	.	ID=Dca33828.1.exon4;Parent=Dca33828.1
scaffold3468	Augustus	exon	19823	19883	.	+	.	ID=Dca33828.1.exon5;Parent=Dca33828.1
scaffold3468	Augustus	exon	20788	20868	.	+	.	ID=Dca33828.1.exon6;Parent=Dca33828.1
scaffold3468	Augustus	exon	20942	21023	.	+	.	ID=Dca33828.1.exon7;Parent=Dca33828.1
scaffold3468	Augustus	exon	21270	21370	.	+	.	ID=Dca33828.1.exon8;Parent=Dca33828.1
scaffold3468	Augustus	exon	22215	22305	.	+	.	ID=Dca33828.1.exon9;Parent=Dca33828.1