Dca33850.1
Annotation
- 2-exons
- f-1
- sp|Q0ZCD0_POPTR#Integrase#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0006278#3F1P0C
- Repeat List (scaffold347)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca33850.1 |
4 |
215 |
216 |
54.62 |
212 |
49 |
7e-61
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q0ZCD0_POPTR |
609 |
850 |
1139 |
21.24 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca33850.1 |
3 |
97 |
216 |
16.66 |
95 |
38 |
7e-12
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
512 |
602 |
707 |
12.87 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold347 |
Augustus |
mRNA |
131402 |
132145 |
. |
+ |
. |
ID=Dca33850.1;Parent=Dca33850 |
| scaffold347 |
Augustus |
exon |
131402 |
131704 |
. |
+ |
. |
ID=Dca33850.1.exon1;Parent=Dca33850.1 |
| scaffold347 |
Augustus |
exon |
131798 |
132145 |
. |
+ |
. |
ID=Dca33850.1.exon2;Parent=Dca33850.1 |
