Dca3390.1
Annotation
- 3-exons
- f-1
- sp|A5BNR5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_035665#GO:0003676;GO:0000166;GO:0016491;GO:0008270;GO:0015074#4F1P0C
- Os08t0125300-01 Integrase, catalytic core domain containing protein.
- Repeat List (scaffold112)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3390.1 |
14 |
1406 |
1406 |
38.69 |
1393 |
36 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5BNR5_VITVI |
287 |
1711 |
1813 |
78.59 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3390.1 |
423 |
1403 |
1406 |
23.54 |
981 |
31 |
8e-127
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
361 |
1405 |
1428 |
73.17 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold112 |
Augustus |
mRNA |
225804 |
230275 |
. |
+ |
. |
ID=Dca3390.1;Parent=Dca3390 |
| scaffold112 |
Augustus |
exon |
225804 |
227666 |
. |
+ |
. |
ID=Dca3390.1.exon1;Parent=Dca3390.1 |
| scaffold112 |
Augustus |
exon |
227823 |
229100 |
. |
+ |
. |
ID=Dca3390.1.exon2;Parent=Dca3390.1 |
| scaffold112 |
Augustus |
exon |
229196 |
230275 |
. |
+ |
. |
ID=Dca3390.1.exon3;Parent=Dca3390.1 |
